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Glossary

UC
ulcerative colitis
CD
Crohn’s disease
IBD
inflammatory bowel disease
IL
interleukin
GWAS
genome wide association studies
eQTL
expression quantitative trait loci
TLR
toll-like receptors
PAMPs
pathogen associated molecular patterns
Th
T helpers
HSCT
hematopoietic stem cell transplant
CDAI
Crohn’s disease activity index
16S
16S rRNA
RGCCA
regularized canonical correlation analysis
MCIA
multiple co-inertia analysis
OTUs
operational taxonomic units
ASV
amplicon sequence variant
CGH
comparative genomic hybridization
PPI
pre-pouch ileum
PCA
principal component analysis
AVE
average variance explained
PERMANOVA
permutational multivariate analysis of variance
AUC
area under the curve
ROC
receiver operating characteristic
BARCELONA
Biologic Assesment of Response and relation to Clinical activity, Endoscopic and radiologic Lesions, in inflammatory bowel disease patients ON Anti TNF-therapies
GE
gene expression
TNF
tumor necrosis factor